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:: Volume 16, Issue 2 (Summer 2019) ::
Sci J Iran Blood Transfus Organ 2019, 16(2): 149-159 Back to browse issues page
A Review of Mitochondrial Biogenesis and Cellular Response
E. Noshadi , A. Arshi * , E. Mahmoudi , H. Jamshidian , M. Dehghani-Samani , R. Hashemzehi , M. Fadaei
Keywords: Key words: Mitochondria, Organelle Biogenesis, DNA
Full-Text [PDF 419 kb]   (7841 Downloads)     |   Abstract (HTML)  (4323 Views)
Type of Study: Review Article | Subject: Genetis
Published: 2019/07/15
Full-Text:   (19310 Views)
    References:
  1. Sarzi E, Rötig A. Mitochondrial genome instability and associated diseases. Med Sci (Paris) 2010; 26(2): 171-6. [Article in French]
  2. Johri A, Beal MF. Mitochondrial dysfunction in neurodegenerative diseases. J Pharmacol Exp Ther 2012; 342(3): 619-30.
  3. Guan G, Wang H, Liang W, Cao C, Tao L, Naseem S, et al. The mitochondrial protein Mcu1 plays important roles in carbon source utilization, filamentation, and virulence in Candida albicans. Fungal Genet Biol 2015; 81: 150-9.
  4. Holmlund T, Farge G, Pande V, Korhonen J, Nilsson L, Falkenberg M. Structure-function defects of the twinkle amino-terminal region in progressive external ophthalmoplegia. Biochim Biophys Acta 2009; 1792(2): 132-9.
  5. Hudson G, Deschauer M, Busse K, Zierz S, Chinnery PF. Sensory ataxic neuropathy due to a novel C10Orf2 mutation with probable germline mosaicism. Neurology 2005; 64(2): 371-3.
  6. Copeland WC. Inherited Mitochondrial Diseases of DNA Replication. Annu Rev Med 2008; 59: 131-46.
  7. Fukasawa Y, Tsuji J, Fu SC, Tomii K, Horton P, Imai K. MitoFates: improved prediction of mitochondrial targeting sequences and their cleavage sites. Mol Cell Proteomics 2015; 14(4): 1113-26.
  8. Wang C, Lu J, Lang Y, Liu T, Wang X, Zhao X, et al. Two novel AGXT mutations identified in primary hyperoxaluria type-1 and distinct morphological and structural difference in kidney stones. Sci Rep 2016; 6: 33652.
  9. Wang S, Wang F, Shi X, Dai J, Peng Y, Guo X, et al. Association between manganese superoxide dismutase (MnSOD) Val-9Ala polymorphism and cancer risk - A meta-analysis. Eur J Cancer 2009; 45(16): 2874-81.
  10. Schon EA, DiMauro S, Hirano M. Human mitochondrial DNA: roles of inherited and somatic mutations. Nat Rev Genet 2012; 13(12): 878-90.
  11. Schapira AH. Mitochondrial diseases. Lancet 2012; 379(9828): 1825-34.
  12. Payne BA, Wilson IJ, Yu-Wai-Man P, Coxhead J, Deehan D, Horvath R, et al. Universal heteroplasmy of human mitochondrial DNA. Hum Mol Genet 2013; 22(2): 384-90.
  13. Hirst J. Why does mitochondrial complex I have so many subunits? Biochem J 2011; 437(2): e1-3.
  14. Smith PM, Fox JL, Winge DR. Biogenesis of the cytochrome bc(1) complex and role of assembly factors. Biochim Biophys Acta 2012; 1817(2): 276-86.
  15. Arakaki N, Nishihama T, Owaki H, Kuramoto Y, Suenaga M, Miyoshi E, et al. Dynamics of mitochondria during the cell cycle. Biol Pharm Bull 2006; 29(9): 1962-5.
  16. Ostojić J, Panozzo C, Lasserre JP, Nouet C, Courtin F, Blancard C, et al. The energetic state of mitochondria modulates complex III biogenesis through the ATP-dependent activity of Bcs1. Cell Metab 2013; 18(4): 567-77.
  17. Kelly DP, Scarpulla RC. Transcriptional regulatory circuits controlling mitochondrial biogenesis and function. Genes Dev 2004; 18(4): 357-68.
  18. Lin J, Tarr PT, Yang R, Rhee J, Puigserver P, Newgard CB, et al. PGC-1beta in the regulation of hepatic glucose and energy metabolism. J Biol Chem 2003; 278: 30843-8.
  19. Ferramosca A, Zara V. Biogenesis of mitochondrial carrier proteins: Molecular mechanisms of import into mitochondria. Biochimica et Biophysica Acta 2013; 1833(3): 494-502.
  20. Paschen SA, Waizenegger T, Stan T, Preuss M, Cyrklaff M, Hell K, et al. Evolutionary conservation of biogenesis of beta-barrel membrane proteins. Nature 2003; 426(6968): 862-6.
  21. Wiedemann N, Kozjak V, Chacinska A, Schonfisch B, Rospert S, Ryan MT, et al. Machinery for protein sorting and assembly in the mitochondrial outer membrane. Nature 2003; 424(6948): 565-71.
  22. Ryan MT, Hoogenraad NJ. Mitochondrial-nuclear communications. Annu Rev Biochem 2007; 76: 701-22.
  23. Chen H, McCaffery JM, Chan DC. Mitochondrial Fusion Protects against Neurodegeneration in the Cerebellum. Cell 2007; 130: 548-62.
  24. Calvo SE, Clauser KR, Mootha VK. MitoCarta2.0: an updated inventory of mammalian mitochondrial proteins. Nucleic Acids Res 2016; 44(D1): D1251-7.
  25. Sun J, Brown TT, Samuels DC, Hulgan T, D'Souza G, Jamieson BD, et al. The Role of Mitochondrial DNA Variation in Age-Related Decline in Gait Speed Among Older Men Living With Human Immunodeficiency Virus. Clin Infect Dis 2018; 67(5): 778-84.
  26. Shevtsov  S,  Nevo-Dinur  K,  Faigon  L,   Sultan LD, Zmudjak M, Markovits M, et al. Control of organelle gene expression by the mitochondrial transcription termination factor mTERF22 in Arabidopsis thaliana plants. PLoS One 2018; 13(7): e0201631.
  27. Clausen AR, Lujan SA, Burkholder AB, Orebaugh CD, Williams JS, Clausen MF, et al. Tracking replication enzymology in vivo by genome-wide mapping of ribonucleotide incorporation. Nat Struct Mol Biol 2015; 22(3): 185-91.
  28. Fusté JM, Wanrooij S, Jemt E, Granycome CE, Cluett TJ, Shi Y, et al. Mitochondrial RNA polymerase is needed for activation of the origin of light-strand DNA replication. Mol Cell 2010; 37(1): 67-78.
  29. Wanrooij S, Fusté JM, Farge G, Shi Y, Gustafsson CM, Falkenberg M. Human mitochondrial RNA polymerase primes lagging-strand DNA synthesis in vitro. Proc Natl Acad Sci USA 2008; 105(32): 11122-7.
  30. Neupert W, Herrmann JM. Translocation of proteins in to mitochondria. Annu Rev Biochem 2007; 76: 723-49.
  31. Davey KM, Parboosingh JS, McLeod DR, Chan A, Casey R, Ferreira P, et al. Mutation of DNAJC19, a human homologue of yeast inner mitochondrial membrane co-chaperones, causes DCMA syndrome, a novel autosomal recessive Barth syndrome-like condition. J Med Genet 2006; 43: 385-93.
  32. Diaz F, Moraes CT. Mitochondrial Biogenesis and Turnover. Cell Calcium 2008; 44(1): 24-35.
  33. Sato T, Esaki M, Fernandez JM, Endo T. Comparison of the protein-unfolding pathways between mitochondrial protein import and atomic-force microscopy measurements. Proc Natl Acad Sci USA 2005; 102: 17999-8004.
  34. Srinivasan S, Guha M, Kashina A, Avadhani NG. Mitochondrial dysfunction and mitochondrial dynamics-The cancer connection. Biochim Biophys Acta Bioenerg 2017; 1858(8): 602-14.
  35. Yi HS, Chang JY, Shong M. The mitochondrial unfolded protein response and mitohormesis: a perspective on metabolic diseases. J Mol Endocrinol 2018; 61(3): R91-R105.
  36. Zhang C, Yuan XR, Li HY, Zhao ZJ, Liao YW, Wang XY, et al. Downregualtion of dynamin-related protein 1 attenuates glutamate-induced excitotoxicity via regulating mitochondrial function in a calcium dependent manner in HT22 cells. Biochem Biophys Res Commun 2014; 443(1): 138-43.
  37. Lobet E, Willemart K, Ninane N, Demazy C, Sedzicki J, Lelubre C, et al. Mitochondrial fragmentation affects neither the sensitivity to TNFα-induced apoptosis of Brucella-infected cells nor the intracellular replication of the bacteria. Sci Rep 2018; 8(1): 5173.
  38. Tang WX, Wu WH, Qiu HY, Bo H, Huang SM. Amelioration of rhabdomyolysis-induced renal mitochondrial injury and apoptosis through suppression of Drp-1 translocation. J Nephrol 2013; 26(6): 1073-82.
  39. Naghdi S, Slovinsky WS, Madesh M, Rubin E, Hajnóczky G. Mitochondrial fusion and Bid-mediated mitochondrial apoptosis are perturbed by alcohol with distinct dependence on its metabolism. Cell Death Dis 2018; 9(10): 1028.
  40. Bocca C, Kane MS, Veyrat-Durebex C, Chupin S, Alban J, Kouassi Nzoughet J, et al. The Metabolomic Bioenergetic Signature of Opa1-Disrupted Mouse Embryonic Fibroblasts Highlights Aspartate Deficiency. Sci Rep 2018; 8(1): 11528.
  41. Dudek J, Rehling P, van der Laan M. Mitochondrial protein import: common principles and physiological networks. Biochimica et Biophysica Acta 2013; 1833(2): 274-85.
  42. Ruegsegger GN, Creo AL, Cortes TM, Dasari S, Nair KS. Altered mitochondrial function in insulin-deficient and insulin-resistant states. J Clin Invest 2018; 128(9): 3671-81.
  43. Carelli V, Maresca A, Caporali L, Trifunov S, Zanna C, Rugolo M. Mitochondria: Biogenesis and mitophagy balance in segregation and clonal expansion of mitochondrial DNA mutations. Int J Biochem Cell Biol 2015; 63: 21-4.
  44. Jager S, Handschin C, St-Pierre J, Spiegelman BM. AMP-activated protein kinase (AMPK) action in skeletal muscle via direct phosphorylation of PGC-1alpha. Proc Natl Acad Sci USA 2007; 104: 12017-22.
  45. Lee S, Kim S, Sun X, Lee JH, Cho H. Cell cycle-dependent mitochondrial biogenesis and dynamics in mammalian cells. Biochem Biophys Res Commun 2007; 357: 111-7.
  46. Arshi A, Ghahramani Seno MM, Ansari H, Doosti A, Khoramian M, Sazgar H. Evaluation of expression levels of GAS5 and NEAT1 lncRNAs in breast cancer samples using RT-qPCR. Armaghane Danesh 2016; 21(3): 278-89. [Article in Farsi]
  47. Mozaffari E, Doosti A, Arshi A, Faghani M. Association of COX-2 Promoter Polymorphisms-765G/C and -1195A/G with Migraine. Iran J Pub Health 2016; 45(12): 1625-35.
  48. Mozaffari E, Doosti A, Nemati R, Faghani M, Arshi A, Makhlooei M. Association of COX-2-765G→C Gene Polymorphism and Migraine in Iranian Populations. Inter J Rev in Life Sci 2015; 5(8): 232-8.
  49. Nochez Y, Arsene S, Gueguen N, Chevrollier A, Ferré M, Guillet V, et al. Acute and late-onset optic atrophy due to a novel OPA1 mutation leading to a mitochondrial coupling defect. Mol Vis 2009; 15: 598-608.
  50. Reiter RJ, Tan DX, Rosales-Corral S, Galano A, Jou MJ, Acuna-Castroviejo D. Melatonin Mitigates Mitochondrial Meltdown: Interactions with SIRT3. Int J Mol Sci 2018; 19(8): E2439.
  51. Picard M, McEwen BS. Psychological Stress and Mitochondria: A Conceptual Framework. Psychosom Med 2018; 80(2): 126-40.
  52. Shutt TE, Gray MW. Bacteriophage origins of mitochondrial replication and transcription proteins. Trends Genet 2006; 22: 90-5.
 
 
 
 
 


 
 
 
 
Sci J Iran Blood Transfus Organ 2019; 16(2): 149-159
Review  Article
 

 

A Review of Mitochondrial Biogenesis and
Cellular Response
 
Noshadi E.1, Arshi A.2, Mahmoudi E.3, Jamshidian H.4,5, Dehghani-Samani M.6,
Hashemzehi R.1, Fadaei M.7
 
 
1Fars Science and Research Branch, Islamic Azad University, Shiraz, Iran
2Young Researchers and Elite Club, Najafabad Branch, Islamic Azad University, Najafabad, Iran
3Young Researchers and Elite Club, Shahrekord Branch, Islamic Azad University, Shahrekord, Iran
4Blood Transfusion Research Center, High Institute for Research and Education in Transfusion Medicine, Tehran, Iran
5Isfahan Blood Transfusion Center, Isfahan, Iran
6Faculty of Basic Sciences, Shahrekord University, Shahrekord, Iran
7Shahrekord University of Medical Science, Shahrekord, Iran
 
 
Abstract
Background and Objectives
Mitochondrial biogenesis is a complex process involving the coordinated expression of mitochondrial and nuclear genes, the import of the products of the latter into the organelle and turnover of this process. Mitochondrial malfunction or defects in any of the many pathways involved in mitochondrial biogenesis can lead to degenerative diseases and possibly play an important part in aging.
 
Materials and Methods
Because of the mitochondrial relationship with some factors such as matrix proteins, cell cycle and evolution, in this review article we examined the mitochondrial relationship with these factors and mechanisms. The data were extracted from NCBI and SID databases.
 
Results
Changes and mutations in mitochondria are common in most of the molecular processes and important diseases including cancer, but these mutations do not result in mitochondria deactivation. Investigating these pathways helps us to identify and treat diseases such as cancer.
 
Conclusions 
The mitochondria is the most important source of cellular energy supply, and mitochondrial damage can interfere with cellular activity and reduce the amount of energy produced and increase the production of free radicals. Mitochondria biogenesis is one of the protective methods of the cell against oxidative stress, which has a cell protective role.
 
Key words: Mitochondria, Organelle Biogenesis, DNA
 
 
 
Received:    6 Aug 2018
Accepted: 14 Nov 2018
 
 

Correspondence: Arshi A., MSc in Genetics. Young Researchers and Elite Club, Najafabad Branch, Islamic Azad  University.
 P.O.Box: 517, Najafabad, Iran. Tel: (+9831) 32607071; Fax: (+9831) 32607071
E-mail:
asghararshi@yahoo.com
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Noshadi E, Arshi A, Mahmoudi E, Jamshidian H, Dehghani-Samani M, Hashemzehi R et al . A Review of Mitochondrial Biogenesis and Cellular Response. Sci J Iran Blood Transfus Organ 2019; 16 (2) :149-159
URL: http://bloodjournal.ir/article-1-1219-en.html


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Volume 16, Issue 2 (Summer 2019) Back to browse issues page
فصلنامه پژوهشی خون Scientific Journal of Iran Blood Transfus Organ
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